package org.tigr.microarray.mev;

public class TMEV {
    
    public final static int SYSTEM = 1000;
    public final static int DB_AVAILABLE = 1001;
    public final static int DB_LOGIN = 1002;
    public final static int DATA_AVAILABLE = 1003;
    public final static int SPOTFIRE_AVAILABLE = 1004;
    public final static int DATA_TYPE_TWO_DYE = 1;
    public final static int DATA_TYPE_AFFY = 2;

    public static final String LAST_LOADED_ARRAY = "last-loaded-array";
    public static final String LAST_LOADED_SPECIES = "last-loaded-species";
    public static final String PROMPT_TO_SAVE_ANALYSIS = "prompt-for-save";
    public static final String PROMPT_TO_GET_ONLINE = "prompt-to-get-online";
    public static final String ALLOWED_ONLINE = "allow-internet-connections";
    public static final String CUSTOM_ANNOTATION_URLS_FILE = "annotation-urls-mapping-file";
    public static final String CURRENT_DATA_PATH = "current-data-path";
    public static final String CURRENT_ANNOTATION_PATH = "current-annotation-path";
    
    public final static int ANALYSIS_LOADED = 101;
    
    public static final int CGH_SPECIES_HS = 0;
    public static final int CGH_SPECIES_MM = 1;
    public static final int CGH_SPECIES_Undef = -100;
    
    private static int coordinatePairCount;
    private static int intensityCount;
    
    
    public static int getCoordinatePairCount() {return TMEV.coordinatePairCount;}
    public static int getIntensityCount() {return TMEV.intensityCount;}
}
